12. Data integration — Single-cell best practices
Dropout imputation and batch effect correction for single-cell RNA sequencing data | Journal of Bio-X Research
Mixed effect model for batch correction
Deseq2 - removing batch effect
Batch effect correction of SMART-seq2 dataset. (A) Batch effect was... | Download Scientific Diagram
Batch Effect Correction
Batch correction methods for nontarget chemical analysis data: application to a municipal wastewater collection system | Analytical and Bioanalytical Chemistry
Correction of batch effect in pooled breast cancer gene expression... | Download Scientific Diagram
Batch effects in single-cell RNA-sequencing data are corrected by matching mutual nearest neighbors | Nature Biotechnology
Assessment of batch-correction methods for scRNA-seq data with a new test metric | bioRxiv
BatchServer: A Web Server for Batch Effect Evaluation, Visualization, and Correction | Journal of Proteome Research
A benchmark of batch-effect correction methods for single-cell RNA sequencing data | Genome Biology | Full Text
Batch Effect Correction in Chromium Single Cell ATAC Data - 10x Genomics
Batch effects vs biological variables
How to Batch Correct Single Cell. Comparing batch correction methods for… | by Nikolay Oskolkov | Towards Data Science
A benchmark of batch-effect correction methods for single-cell RNA sequencing data | Genome Biology | Full Text
A test metric for assessing single-cell RNA-seq batch correction | Nature Methods
rna seq - Batch effect correction using a subset of samples - using DE genes - Bioinformatics Stack Exchange
Batch effects in single cell RNA sequencing
Batch Effect Correction - 10x Genomics
Comparison of statistical methods and the use of quality control samples for batch effect correction in human transcriptome data | PLOS ONE
CellMixS: quantifying and visualizing batch effects in single-cell RNA-seq data | Life Science Alliance
How to Batch Correct Single Cell. Comparing batch correction methods for… | by Nikolay Oskolkov | Towards Data Science
CellMixS: quantifying and visualizing batch effects in single-cell RNA-seq data | Life Science Alliance
Batch effect correction
BatchServer: A Web Server for Batch Effect Evaluation, Visualization, and Correction | Journal of Proteome Research
Why Batch Effects Matter in Omics Data, and How to Avoid Them - ScienceDirect
