Batch Effect Correction - 10x Genomics
12. Data integration — Single-cell best practices
Correcting batch effects in single-cell RNA sequencing data by matching mutual nearest neighbours | bioRxiv
2 Introduction to Single-Cell RNA-seq | Analysis of single cell RNA-seq data
Webinar: Fast, sensitive, and accurate integration of single-cell data with Harmony | Ilya Korsunsky - YouTube
A benchmark of batch-effect correction methods for single-cell RNA sequencing data | Genome Biology | Full Text
CellMixS: quantifying and visualizing batch effects in single-cell RNA-seq data | Life Science Alliance
scID Uses Discriminant Analysis to Identify Transcriptionally Equivalent Cell Types across Single-Cell RNA-Seq Data with Batch Effect - ScienceDirect
Removal of Batch Effects from Single-cell RNA-Seq | RNA-Seq Blog
Batch effects in single-cell RNA-sequencing data are corrected by matching mutual nearest neighbors | Nature Biotechnology
A test metric for assessing single-cell RNA-seq batch correction | Nature Methods
Single Cell Orange 06: Batch Effect Removal - YouTube
Frontiers | deepMNN: Deep Learning-Based Single-Cell RNA Sequencing Data Batch Correction Using Mutual Nearest Neighbors
Quick start to Harmony • harmony
CellMixS: quantifying and visualizing batch effects in single-cell RNA-seq data | Life Science Alliance
A benchmark of batch-effect correction methods for single-cell RNA sequencing data | Genome Biology | Full Text
Dropout imputation and batch effect correction for single-cell RNA sequencing data | Journal of Bio-X Research
Batch alignment of single-cell transcriptomics data using deep metric learning | Nature Communications
Batch Effect Correction in Chromium Single Cell ATAC Data - 10x Genomics
Perspectives for better batch effect correction in mass-spectrometry-based proteomics - Computational and Structural Biotechnology Journal
Batch Effect Correction in Chromium Single Cell ATAC Data - 10x Genomics
Figure 1 from On the widespread and critical impact of systematic bias and batch effects in single-cell RNA-Seq data | Semantic Scholar
Batch effects in single cell RNA sequencing
